Publications of Michael Paquette

Journal Article (8)

2022
Journal Article
Gräßle, T.; Crockford, C.; Eichner, C.; Girard-Buttoz, C.; Jäger, C.; Kirilina, E.; Lipp, I.; EBC Brain Sourcing Consortium; Düx, A.; Edwards, L. et al.; Jauch, A.; Kopp, K. S.; Paquette, M.; Pine, K.; Haun, D. B. M.; McElreath, R.; Anwander, A.; Gunz, P.; Morawski, M.; Friederici, A. D.; Weiskopf, N.; Leendertz, F. H.; Wittig, R. M.: Sourcing high tissue quality brains from deceased wild primates with known socio-ecology. Methods in Ecology and Evolution (accepted)
2020
Journal Article
Eichner, C.; Paquette, M.; Mildner, T.; Schlumm, T.; Pléh, K.; Samuni, L.; Crockford, C.; Wittig, R. M.; Jäger, C.; Möller, H. E. et al.; Friederici, A. D.; Anwander, A.: Increased sensitivity and signal-to-noise ratio in diffusion-weighted MRI using multi-echo acquisitions. NeuroImage 221, 117172 (2020)
Journal Article
Nath, V.; Schilling, K. G.; Parvathaneni, P.; Huo, Y.; Blaber, J. A.; Hainline, A. E.; Barakovic, M.; Romascano, D.; Rafael‐Patino, J.; Frigo, M. et al.; Girard, G.; Thiran, J.; Daducci, A.; Rowe, M.; Rodrigues, P.; Prčkovska, V.; Aydogan, D. B.; Sun, W.; Shi, Y.; Parker, W. A.; Ould Ismail, A. A.; Verma, R.; Cabeen, R. P.; Toga, A. W.; Newton, A. T.; Wasserthal, J.; Neher, P.; Maier‐Hein, K.; Savini, G.; Palesi, F.; Kaden, E.; Wu, Y.; He, J.; Feng, Y.; Paquette, M.; Rheault, F.; Sidhu, J.; Lebel, C.; Leemans, A.; Descoteaux, M.; Dyrby, T. B.; Kang, H.; Landman, B. A.: Tractography reproducibility challenge with empirical data (TraCED): The 2017 ISMRM diffusion study group challenge. Journal of Magnetic Resonance Imaging 51 (1), pp. 234 - 249 (2020)
2017
Journal Article
Maier-Hein, K. H.; Neher, P. F.; Houde, J.-C.; Côté, M.-A.; Garyfallidis, E.; Zhong, J.; Chamberland, M.; Yeh, F.-C.; Lin, Y.-C.; Ji, Q. et al.; Reddick, W. E.; Glass, J. O.; Chen, D. Q.; Feng, Y.; Gao, C.; Wu, Y.; Ma, J.; He, R.; Li, Q.; Westin, C.-F.; Deslauriers-Gauthier, S.; González, J. O. O.; Paquette, M.; St-Jean, S.; Girard, G.; Rheault, F.; Sidhu, J.; Tax, C. M. W.; Guo, F.; Mesri, H. Y.; Dávid, S.; Froeling, M.; Heemskerk, A. M.; Leemans, A.; Boré, A.; Pinsard, B.; Bedetti, C.; Desrosiers, M.; Brambati, S.; Doyon, J.; Sarica, A.; Vasta, R.; Cerasa, A.; Quattrone, A.; Yeatman, J.; Khan, A. R.; Hodges, W.; Alexander, S.; Romascano, D.; Barakovic, M.; Auría, A.; Esteban, O.; Lemkaddem, A.; Thiran, J.-P.; Cetingul, H. E.; Odry, B. L.; Mailhe, B.; Nadar, M. S.; Pizzagalli, F.; Prasad, G.; Villalon-Reina, J. E.; Galvis, J.; Thompson, P. M.; Requejo, F. D. S.; Laguna, P. L.; Lacerda, L. M.; Barrett, R.; Dell’Acqua, F.; Catani, M.; Petit, L.; Caruyer, E.; Daducci, A.; Dyrby, T. B.; Holland-Letz, T.; Hilgetag, C. C.; Stieltjes, B.; Descoteaux, M.: The challenge of mapping the human connectome based on diffusion tractography. Nature Communications 8, 1349 (2017)
2016
Journal Article
Paquette, M.; Gilbert, G.; Descoteaux, M.: Optimal DSI reconstruction parameter recommendations: Better ODFs and better connectivity. NeuroImage 142, pp. 1 - 13 (2016)
Journal Article
Deslauriers-Gauthier, S.; Marziliano, P.; Paquette, M.; Descoteaux, M.: The application of a new sampling theorem for non-bandlimited signals on the sphere: Improving the recovery of crossing fibers for low b-value acquisitions. Medical Image Analysis 30, pp. 46 - 59 (2016)
2015
Journal Article
Ning, L.; Laun, F.; Gur, Y.; DiBella, E. V.R.; Deslauriers-Gauthier, S.; Megherbi, T.; Ghosh, A.; Zucchelli, M.; Menegaz, G.; Fick, R. et al.; St-Jean, S.; Paquette, M.; Aranda, R.; Descoteaux, M.; Deriche, R.; O’Donnell, L.; Rathi, Y.: Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use? Medical Image Analysis 26 (1), pp. 316 - 331 (2015)
Journal Article
Paquette, M.; Merlet, S.; Gilbert, G.; Deriche, R.; Descoteaux, M.: Comparison of sampling strategies and sparsifying transforms to improve compressed sensing diffusion spectrum imaging. Magnetic Resonance in Medicine 73 (1), pp. 401 - 416 (2015)

Conference Paper (13)

2022
Conference Paper
Eichner, C.; Paquette, M.; Gerbeth, H.; Jäger, C.; Bock, C.; Gallardo, G.; Möller, T.; Crockford, C.; Wittig, R.; Weiskopf, N. et al.; Friederici, A. D.; Anwander, A.: Does one size fit all? Reconstructing crossing fibers in diffusion MRI using spherical deconvolution with local response functions. In: Proceedings of the 31th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 31, 0877. (2022)
Conference Paper
Paquette, M.; Eichner, C.; Anwander, A.: Connectivity matrix from a fODF weighted graph: An alternative to probabilistic tractography. In: Proceedings of the 31st Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 31, 0431. (2022)
2021
Conference Paper
Eichner, C.; Paquette, M.; Gallardo, G.; Bock, C.; Gräßle, T.; Jaffe, J. E.; Jäger, C.; Kirilina, E.; Lipp, I.; Mildner, T. et al.; Schlumm, T.; Wermter, F.; Möller, H. E.; Weiskopf, N.; Crockford, C.; Wittig, R. M.; Friederici, A. D.; Anwander, A.: Developmental brain connectivity in chimpanzees using high-resolution diffusion MRI. In: Proceedings of the 27th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Vol. 27, 2255. (2021)
Conference Paper
Eichner, C.; Paquette, M.; Gallardo, G.; Bock, C.; Jaffe, J. E.; Jäger, C.; Kirilina, E.; Lipp, I.; Mildner, T.; Schlumm, T. et al.; Wermter, F.; Möller, H. E.; Weiskopf, N.; Crockford, C.; Wittig, R. M.; Friederici, A. D.; Anwander, A.: High-resolution post-mortem diffusion MRI acquisitions for connectivity analyses in chimpanzees. In: Proceedings of the 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 29, 1712. (2021)
Conference Paper
Paquette, M.; Eichner, C.; Gallardo, G.; Anwander, A.: Adapted microscopy estimation of axon diameters for diffusion MRI comparison. In: Proceedings of the 29th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 29, 2035 . (2021)
2020
Conference Paper
Eichner, C.; Paquette, M.; Friederici, A. D.; Anwander, A.: Mitigating impacts of tissue-heterogeneity and noise bias on MP-PCA denoising for high-quality diffusion MRI. In: Proceedings of the 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 28, 4359. (2020)
Conference Paper
Eichner, C.; Paquette, M.; Mildner, T.; Schlumm, T.; Crockford, C.; Wittig, R. M.; Jäger, C.; Morawski, M.; Möller, H. E.; Friederici, A. D. et al.; Anwander, A.: Sensitivity gain from multi-echo acquisitions in ex-vivo diffusion imaging: Numerical simulations and experimental verification. In: Proceedings of the 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 28, 4499. (2020)
Conference Paper
Paquette, M.; Tax, C. M.W.; Eichner, C.; Anwander, A.: Impact of gradient non-linearities on B-tensor diffusion encoding. In: Proceedings of the 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 28, 4412. (2020)
Conference Paper
Szczepankiewicz, F.; Eichner, C.; Anwander, A.; Westin, C.-F.; Paquette, M.: The impact of gradient non-linearity on Maxwell compensation when using asymmetric gradient waveforms for tensor-valued diffusion encoding. In: Proceedings of the 28th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 28, 3391. (2020)
2019
Conference Paper
Eichner, C.; Kirilina, E.; Paquette, M.; Mildner, T.; Schlumm, T.; Pine, K.; Müller-Axt, C.; Lipp, I.; Möller, H. E.; Gallardo, G. et al.; Wittig, R. M.; Crockford, C.; Weiskopf, N.; Friederici, A. D.; Anwander, A.: Evolution of white matter connectivity and cortical myelination in hominoids: Wild chimpanzee pilot. In: Proceedings of the 25th Annual Meeting of the Organization for Human Brain Mapping (OHBM), Vol. 25, T090. (2019)
Conference Paper
Eichner, C.; Fan, Q.; Huang, S.; Jones, D.; Kirilina, E.; Paquette, M.; Rudrapatna, U.; Tax, C.; Tian, Q.; Weiskopf, N. et al.; Anwander, A.: A joint recommendation for optimized preprocessing of connectom diffusion MRI data. In: Proceedings of the 27th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 27, 1047. (2019)
Conference Paper
Eichner, C.; Mildner, T.; Paquette, M.; Schlumm, T.; Crockford, C.; Wittig, R. M.; Kirilina, E.; Jäger, C.; Möller, H. E.; Weiskopf, N. et al.; Friederici, A. D.; Anwander, A.: Multi-echo segmented diffusion-weighted MRI for ex-vivo whole-brain measurements with 300mT/m gradients. In: Proceedings of the 27th Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Vol. 27, 3510. (2019)

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