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Journal Article (7)
2020
Journal Article
10 (1), 10712 (2020)
Domain-specific cues improve robustness of deep learning-based segmentation of CT volumes. Scientific Reports 2019
Journal Article
10, 5753 (2019)
Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish. Nature Communications
Journal Article
10, 16 (2019)
Ontology patterns for the representation of quality changes of cells in time. Journal of Biomedical Semantics
Journal Article
159, pp. 784 - 793 (2019)
A pattern-based approach to a cell tracking ontology. Procedia Computer Science 2018
Journal Article
182, pp. 417 - 428 (2018)
Developing 3D microscopy with CLARITY on human brain tissue: Towards a tool for informing and validating MRI-based histology. NeuroImage 2017
Journal Article
6, e28307 (2017)
Cell-accurate optical mapping across the entire developing heart. eLife 2007
Journal Article
46 (5), pp. 614 - 622 (2007)
Large histological serial sections for computational tissue volume reconstruction. Methods of Information in Medicine Conference Paper (3)
2019
Conference Paper
Forensic age estimation with Bayesian convolutional neural networks based on panoramic dental X-ray imaging. In: Proceedings of the 2019 International Conference on Medical Imaging with Deep Learning (MIDL). (2019)
Conference Paper
Convolutional neural network stacking for medical image segmentation in CT scans. In: 2019 Kidney Tumor Segmentation Challenge. MICCAI 2019, Shenzhen, China, October 13, 2019 - October 19, 2019. University of Minnesota Libraries Publishing, Minneapolis, MN (2019)
2018
Conference Paper
Combining deep learning and active contours opens the way to robust, automated analysis of brain cytoarchitectonics. In: Machine Learning in Medical Imaging 2018, pp. 179 - 187. 9th International Workshop on Machine Learning in Medical Imaging, Granada, Spain, September 16, 2018. Springer, Cham (2018)
Meeting Abstract (2)
2018
Meeting Abstract
Iron-induced relaxation mechanisms in the human substantia nigra: Towards quantifying iron load in dopaminergic neurons. In Proceedings of the ISMRM 26th Annual Meeting & Exhibition. Joint Annual Meeting ISMRM-ESMRMB 2018, Paris Expo Porte de Versailles, June 16, 2018 - June 21, 2019. (2018)
2011
Meeting Abstract
11, p. P34 - P34. BioMed Central, London (2011)
Inhibitors of the phosphodiesterase 2 increased axonal fibre growth in a dopaminergic organotypic ex vivo slice co-culture model. In BMC Pharmacology, Poster (2)
2019
Poster
Detecting fat artifacts in diffusion MRI with deep learning. 9th IMPRS NeuroCom Summer School, Leipzig, Germany (2019)
2018
Poster
Improving high-resolution qunatitative MRI maps for in-vivo histology MRI of the human brain. Medical Imaging Summer School 2018 - Medical Imaging Meets Deep Learning, Favignana, Italy (2018)
Working Paper (2)
2018
Working Paper
Combining deep learning and active contours opens the way to robust, automated analysis of brain cytoarchitectonics. BioRxiv (2018)
2017
Working Paper
Pan-embryo cell dynamics of germlayer formation in zebrafish. bioRxiv (2017)
Manuscript (1)
2019
Manuscript
A framework for CT image segmentation inspired by the clinical environment. arXiv (2019)